BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020A12LP1|AL427564
(1066 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1403 1063 0.0
>3x_Contig1403
Length = 7711
Score = 1063 bits (532), Expect = 0.0
Identities = 550/558 (98%)
Strand = Plus / Minus
Query: 1 agatgaagttggctttggctagagctktgttgaagaacgctgatatcttgttgttggatg 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 568 agatgaagttggctttggctagagctgtgttgaagaacgctgatatcttgttgttggatg 509
Query: 61 aaccaactaaccatttggataccgtcaacgttaactggttggttgaatacttgaacacct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 aaccaactaaccatttggataccgtcaacgttaactggttggttgaatacttgaacacct 449
Query: 121 gtkgtatcacttccatcattgtttcccacgactccggtttcttggacaaggtctgtcaat 180
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 gtggtatcacttccatcattgtttcccacgactccggtttcttggacaaggtctgtcaat 389
Query: 181 acattatccattacgaaggtttgaagttgagaaagtacaagggtaacttgtccgaattcg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 acattatccattacgaaggtttgaagttgagaaagtacaagggtaacttgtccgaattcg 329
Query: 241 tcaagaagtgcccaactgctaagtcttactacgaattgggtgcctctkaattagaattca 300
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 328 tcaagaagtgcccaactgctaagtcttactacgaattgggtgcctctgaattagaattca 269
Query: 301 gattcccagaaccaggttacttggaaggtgttaagaccaagcaaaaggctatcgtcaagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 gattcccagaaccaggttacttggaaggtgttaagaccaagcaaaaggctatcgtcaagg 209
Query: 361 tttctaacatgactttccaatacccaggtactgctaagccacaaatctctgacatttctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 tttctaacatgactttccaatacccaggtactgctaagccacaaatctctgacatttctt 149
Query: 421 tccaatgttctttgtcctcaagaattgctgtcattggtccaaatggtgctggtaagtcca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 tccaatgttctttgtcctcaagaattgctgtcattggtccaaatggtgctggtaagtcca 89
Query: 481 ctttgattaacgtcttgaccggtgaactgttgccaactgtcggtgaagtttacactcacg 540
||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||
Sbjct: 88 ctttgattaacgtcttgaccggtgaactgttgccaactgtcggtgcagtttaccctcccg 29
Query: 541 agaactgtcgtatcgctt 558
|| ||||||||||||||
Sbjct: 28 cgacctgtcgtatcgctt 11
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6927
Number of Sequences: 1807
Number of extensions: 6927
Number of successful extensions: 57
Number of sequences better than 1.0e-20: 1
length of query: 1066
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1050
effective length of database: 10,329,639
effective search space: 10846120950
effective search space used: 10846120950
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)